Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827540.1_cds_XP_016503109.1_16679
CDS Infomation

[gene=LOC107821201] [db_xref=GeneID:107821201] [protein=probable myosin-binding protein 5] [protein_id=XP_016503109.1] [location=join(4376..4746,4980..5329,5858..6727,6924..7147)] [gbkey=CDS]
Sequence

ATGGATTCAGGATCATTCAAGTGCTTTGGTGATCAGAAGTTGGGAAAATTTGTACATTTC
TTCGTATATGCTATTCTTGAATGGGTGTTGATCATTACGCTTTTCATTGATGGATTTCTT
GCATTTTTTGCCAATGAATTTGCCAAATTCTTTGAATTAAATATTCCATGCTTGCTTTGC
ACGAGGATAGATCATGTTCTTGTGCACAGGAACTCAAATTTCTATTACAATGATTCCATT
TGTGATGTTCACAAGAAGGACCTTTCTTCCCTTGCCTATTGCCATGTTCACAAGAAGCTC
TCTGAAATCAAGAATATGTGTGAAGGCTGCCTTTTGTCATTTGCAACCGAGAAAGATGCC
GATTGCCATAGGTACAAGTCACTAGCTGGGATTTTGCACAAGGACATTGATTGCTTTGCA
GGGGATGATATGAAAACAGGGAAGAAAGAATTAGCTGAGACCATCCAAATAGAGAAGGGT
ATAGTACATAGGTGTTCTTGTTGTGGGGAGCCTCTAAAAATGAGGTCCAAATATGCAAGG
AACACATCAATAAATGGAAGGTCTTATTCTCAAGCTCCTGCACCTTCTCCTCGAGCTTCT
CCTAGAGCTCCATTATTAGGTGCATGGAGAAATATTGAGGAAGTGCGCCATGTTGAATCG
CCTCGCAGTCGCTACACAGACCTCAAATTCATCCAAGATGATGAAGGCCCCTCAAATGCA
GGTAAAGAGGATGTAAAAGCTGCTACTATGCCACTGCTAGCACATTCCGAAATCACACAT
GAAGCTCCCTGCAAAACCCCAAATTGTACAAGAAACAAATTTTTTGGAATTCCATTAACA
GACTCAGCTCAAGAAAGTCCGAGGTTGTCTCGTCACAGGCCCAGAAAGTCATGGCTTAGT
GATAAAATTGAAGTCACTTCAGAGGGTAATGACACAAGTAGTGCATTGAACGAATTAGAA
GACGACATCTTGCATCGGTTGAAAAAGCAGGTTCATTTGGACCGTAAGTCTCTAGTGGCA
CTATACATGGAATTAGACGAAGAAAGAAGTGCATCTGCTATTGCAGCGAATAATGCAATG
GCTATGATCACTCGTTTGCAAGCCGAGAAAGCAGCTGTTGAAATGGAAGCATTTCAGTAT
CAGAGAATGATGGAAGAGCAAGCAGAATATGATCAAGAGGCGTTGCAGTTCATGAACGAC
GAGCTTTTGAAGAAAGAGGAAGAAATGAAGGTGTTAGAAGCTGAACTTGAGACTTATAGG
GAAAGATATGGACATATAAAGACAGTAGGTAGTGAAGTTTGTGAAGTTGATGCTGATGAA
GATTATCAAGAACTGAAATCTCAGTGTTTATCATCTATTAGTGAGAGATCAGATTGTGCC
AGCCTGGATGAAGTAGATCGGCATAGAGTAAACGAGCGTCCATTTCAGTGTTCCGGGGAA
CATGGAGGGGTCAATGTGGATGATTCACAACTTGATTTTGAGAAACAGAGATCTTATCTT
ATGGGTTTGTTGACAGATGTTGTAGAGAAAATTAAAACATCTCCTGAAGACGAATCTCAT
AAGTTGGAACCAAACATGACCGAAGAAAAAGGAAGTGAAAATAAGGTCACTCTCACAAGA
GAAGTGTCATTAATTGGAGAAAGGTTGAGAGCCATTGAAGCAGAAAGCGGCTTCTTAAAA
CATGCTGCGATGACATTACAGAGCGGTGATGAAGGAAGCAAACTCTTAACTGAGATAGCT
CAACATCTGCAGAAGCTAAGATGCTCGGTCAATACCTCATCAGCGGATGCAGATGCTGGG
ATTCAGTCCAAATAA

Peptide Sequence

PEP ID

XP_016503109.1
PEP Infomation

PREDICTED: probable myosin-binding protein 5 [Nicotiana tabacum]
Sequence

MDSGSFKCFGDQKLGKFVHFFVYAILEWVLIITLFIDGFLAFFANEFAKFFELNIPCLLC
TRIDHVLVHRNSNFYYNDSICDVHKKDLSSLAYCHVHKKLSEIKNMCEGCLLSFATEKDA
DCHRYKSLAGILHKDIDCFAGDDMKTGKKELAETIQIEKGIVHRCSCCGEPLKMRSKYAR
NTSINGRSYSQAPAPSPRASPRAPLLGAWRNIEEVRHVESPRSRYTDLKFIQDDEGPSNA
GKEDVKAATMPLLAHSEITHEAPCKTPNCTRNKFFGIPLTDSAQESPRLSRHRPRKSWLS
DKIEVTSEGNDTSSALNELEDDILHRLKKQVHLDRKSLVALYMELDEERSASAIAANNAM
AMITRLQAEKAAVEMEAFQYQRMMEEQAEYDQEALQFMNDELLKKEEEMKVLEAELETYR
ERYGHIKTVGSEVCEVDADEDYQELKSQCLSSISERSDCASLDEVDRHRVNERPFQCSGE
HGGVNVDDSQLDFEKQRSYLMGLLTDVVEKIKTSPEDESHKLEPNMTEEKGSENKVTLTR
EVSLIGERLRAIEAESGFLKHAAMTLQSGDEGSKLLTEIAQHLQKLRCSVNTSSADADAG
IQSK

Transcript Sequence

Gene sequence data has not been registered.